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Summary
Technology Detail
Technology Description
Protein Digestion Simulator Basic Tool
Category
Software
PRC
Pacific Northwest National Laboratory
Publication Description
The Protein Digestion Simulator Basic can be used to read a text file containing protein or peptide sequences (fasta format or delimited text) then output the data to a tab-delimited file.
Methodology
It can optionally digest the input sequences using trypsin or partial trypsin rules, and can add the predicted normalized elution time (NET) values for the peptides. It can also validate a fasta file, testing it against a set of rules that identify common formatting errors.
Resource
http://ncrr.pnl.gov/software/ProteinDigestionSimulatorBasic.stm
