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Technology DescriptionThis paper describes a method of time-controlled seeding to separate the stages of nucleation and growth in protein crystallization using a microfluidic device. We quantified microfluidic seeding using a model protein, developed a strategy to produce diffraction-quality crystals of proteins recalcitrant to traditional methods, and solved de novo the X-ray crystal structure of Oligoendopeptidase F.
CategoryStructure
PRCScripps Research Institute
PubMed ID17099920
AuthorCory J. Gerdts, Valentina Tereshko, Maneesh K. Yadav, Irina Dementieva, Frank Collart, Andrzej Joachimiak, Raymond C. Stevens, Peter Kuhn, Anthony Kossiakoff, and Rustem F. Ismagilov
Publication DescriptionProteins are crystallized to determine their three-dimensional structures, to understand protein function, and aid in drug design, but crystallization can be an unpredictable and stochastic process. Microfluidics is emerging as a tool to perform crystallization trials faster, cheaper, in smaller volumes, and with a higher level of control.
MethodologyThe system uses soft lithography microfluidics to form plugs of controlled size and composition surrounded by a fluorocarbon carrier fluid in glass microcapillaries. To separate the nucleation and growth stages, a microfluidic device was designed to control multiple reactions in sequence and in time. To validate this method with challenging structurally uncharacterized targets, we crystallized SARS nucleocapsid N-terminal domain (“SARS protein”) and Oligoendopeptidase F from Bacillus stearothermophilus.

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